Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Gm15889-202ENSMUST00000212669 2443 ntBASIC9.19□□□□□ -0.94
Rpl39lQ9CQD0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Gm43799-201ENSMUST00000201845 579 ntBASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 CT010506.4-201ENSMUST00000225457 351 ntBASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rpl39lQ9CQD0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Gm25925-201ENSMUST00000158314 306 ntBASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms