Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.8□□□□□ -0.2
Msh4Q99MT2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msh4Q99MT2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.79□□□□□ -0.2
Msh4Q99MT2 Gm27430-201ENSMUST00000184585 107 ntBASIC13.79□□□□□ -0.2
Msh4Q99MT2 Gm10576-201ENSMUST00000191927 825 ntBASIC13.79□□□□□ -0.2
Msh4Q99MT2 Gm44333-201ENSMUST00000197168 107 ntBASIC13.79□□□□□ -0.2
Msh4Q99MT2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.79□□□□□ -0.2
Msh4Q99MT2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.79□□□□□ -0.2
Msh4Q99MT2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.79□□□□□ -0.2
Msh4Q99MT2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Msh4Q99MT2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msh4Q99MT2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.78□□□□□ -0.2
Msh4Q99MT2 Gm8749-201ENSMUST00000117737 331 ntBASIC13.78□□□□□ -0.2
Msh4Q99MT2 Gm13015-201ENSMUST00000118674 204 ntBASIC13.78□□□□□ -0.2
Msh4Q99MT2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 AA543401-201ENSMUST00000164248 1269 ntBASIC13.78□□□□□ -0.2
Msh4Q99MT2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Auts2-212ENSMUST00000178555 309 ntBASIC13.78□□□□□ -0.2
Msh4Q99MT2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Gm9726-201ENSMUST00000180321 678 ntBASIC13.78□□□□□ -0.2
Msh4Q99MT2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.78□□□□□ -0.2
Msh4Q99MT2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Gm45098-201ENSMUST00000207179 657 ntBASIC13.78□□□□□ -0.2
Msh4Q99MT2 Gm18049-201ENSMUST00000208909 581 ntBASIC13.78□□□□□ -0.2
Msh4Q99MT2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Msh4Q99MT2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Msh4Q99MT2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Msh4Q99MT2 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.77□□□□□ -0.2
Msh4Q99MT2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Msh4Q99MT2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms