Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Gm21470-201ENSMUST00000187680 696 ntBASIC14.1□□□□□ -0.15
Cstf1Q99LC2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cstf1Q99LC2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Gm27572-201ENSMUST00000183702 255 ntBASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Gm27847-201ENSMUST00000183711 107 ntBASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Gm27375-201ENSMUST00000183799 107 ntBASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cstf1Q99LC2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cstf1Q99LC2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cstf1Q99LC2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.08□□□□□ -0.15
Cstf1Q99LC2 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.08□□□□□ -0.15
Cstf1Q99LC2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf1Q99LC2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms