Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.25□□□□□ -0.13
Cdk9Q99J95 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.25□□□□□ -0.13
Cdk9Q99J95 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cdk9Q99J95 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.24□□□□□ -0.13
Cdk9Q99J95 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Gm13464-201ENSMUST00000119418 935 ntBASIC14.24□□□□□ -0.13
Cdk9Q99J95 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Gm2651-201ENSMUST00000203560 838 ntBASIC14.24□□□□□ -0.13
Cdk9Q99J95 Gm18246-201ENSMUST00000221023 728 ntBASIC14.24□□□□□ -0.13
Cdk9Q99J95 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.24□□□□□ -0.13
Cdk9Q99J95 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.24□□□□□ -0.13
Cdk9Q99J95 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk9Q99J95 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdk9Q99J95 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdk9Q99J95 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.23□□□□□ -0.13
Cdk9Q99J95 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.23□□□□□ -0.13
Cdk9Q99J95 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms