Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Gm23776-201ENSMUST00000158993 325 ntBASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Auts2-212ENSMUST00000178555 309 ntBASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Trbv27-201ENSMUST00000193711 277 ntBASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 AC116589.9-201ENSMUST00000221462 908 ntBASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb20Q91XZ9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm13823-201ENSMUST00000119930 345 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm22985-201ENSMUST00000122754 116 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm22094-201ENSMUST00000158976 117 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm16147-201ENSMUST00000162143 373 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm25144-201ENSMUST00000179561 110 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm25352-201ENSMUST00000179815 110 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm34701-202ENSMUST00000204685 360 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm45259-201ENSMUST00000209217 1006 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 AC163038.1-201ENSMUST00000223632 1142 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb20Q91XZ9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm11877-201ENSMUST00000118921 852 ntBASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm6047-201ENSMUST00000167221 574 ntBASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb20Q91XZ9 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms