Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm25255-201ENSMUST00000179579 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm24755-201ENSMUST00000179691 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm26506-201ENSMUST00000179692 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm25086-201ENSMUST00000179931 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm23243-201ENSMUST00000180047 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm24659-201ENSMUST00000180212 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm24169-201ENSMUST00000180244 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm23689-201ENSMUST00000180354 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm27359-201ENSMUST00000184153 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm27785-201ENSMUST00000184268 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm27466-201ENSMUST00000184396 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm27703-201ENSMUST00000184836 110 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm43575-201ENSMUST00000196420 516 ntBASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim29Q8R2Q0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Gm13015-201ENSMUST00000118674 204 ntBASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Gm10253-201ENSMUST00000194270 940 ntBASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 AA619741-201ENSMUST00000195095 646 ntBASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim29Q8R2Q0 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim29Q8R2Q0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Gm15957-201ENSMUST00000118893 974 ntBASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Gm13823-201ENSMUST00000119930 345 ntBASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim29Q8R2Q0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms