Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chmp7Q8R1T1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp7Q8R1T1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp7Q8R1T1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Chmp7Q8R1T1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Chmp7Q8R1T1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp7Q8R1T1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Chmp7Q8R1T1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp7Q8R1T1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp7Q8R1T1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp7Q8R1T1 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Gm15376-201ENSMUST00000122258 783 ntBASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp7Q8R1T1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Mir1938-201ENSMUST00000158746 100 ntBASIC18■□□□□ 0.47
Chmp7Q8R1T1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Gm27772-201ENSMUST00000184900 187 ntBASIC18■□□□□ 0.47
Chmp7Q8R1T1 Gm8463-201ENSMUST00000208573 613 ntBASIC18■□□□□ 0.47
Chmp7Q8R1T1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp7Q8R1T1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Gm12390-201ENSMUST00000117897 397 ntBASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Gm26464-201ENSMUST00000157094 305 ntBASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Mir1982-201ENSMUST00000157368 74 ntBASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Gm27486-201ENSMUST00000184923 80 ntBASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp7Q8R1T1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms