Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.85□□□□□ -0.51
Smim4Q8C1Q6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Gm1401-201ENSMUST00000122048 772 ntBASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Rpph1-201ENSMUST00000175096 319 ntBASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Gm5364-201ENSMUST00000216789 889 ntBASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim4Q8C1Q6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Smim4Q8C1Q6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Gm6973-201ENSMUST00000117080 721 ntBASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.83□□□□□ -0.52
Smim4Q8C1Q6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms