Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf3Q8C120 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Gm6222-201ENSMUST00000120787 396 ntBASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh3rf3Q8C120 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Gm24158-201ENSMUST00000175263 71 ntBASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Gm5312-201ENSMUST00000203728 547 ntBASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh3rf3Q8C120 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Gm27631-201ENSMUST00000184163 466 ntBASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Gm7774-201ENSMUST00000200064 533 ntBASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf3Q8C120 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms