Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf4Q8BQZ5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm22065-201ENSMUST00000103753 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm22066-201ENSMUST00000103761 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm24932-201ENSMUST00000103763 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm24115-201ENSMUST00000103799 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm22190-201ENSMUST00000103827 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm22191-201ENSMUST00000103831 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm24721-201ENSMUST00000103849 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm28018-201ENSMUST00000103869 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm26399-201ENSMUST00000103937 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm25349-201ENSMUST00000177728 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm23616-201ENSMUST00000177797 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm25871-201ENSMUST00000177816 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm24752-201ENSMUST00000178240 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm24496-201ENSMUST00000178287 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm25649-201ENSMUST00000178476 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm25548-201ENSMUST00000178681 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm23147-201ENSMUST00000178841 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm26095-201ENSMUST00000179270 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm22171-201ENSMUST00000179283 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm23936-201ENSMUST00000179354 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm22619-201ENSMUST00000179516 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm25255-201ENSMUST00000179579 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm24755-201ENSMUST00000179691 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm26506-201ENSMUST00000179692 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm25086-201ENSMUST00000179931 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm23243-201ENSMUST00000180047 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm24659-201ENSMUST00000180212 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm24169-201ENSMUST00000180244 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm23689-201ENSMUST00000180354 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm27359-201ENSMUST00000184153 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm27785-201ENSMUST00000184268 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm27466-201ENSMUST00000184396 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm27703-201ENSMUST00000184836 110 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Olfr286-202ENSMUST00000205305 969 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4Q8BQZ5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Mir449b-201ENSMUST00000104833 80 ntBASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms