Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 AC154462.2-201ENSMUST00000227519 370 ntBASIC19.75■□□□□ 0.75
Usp54Q8BL06 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp54Q8BL06 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 n-R5s195-201ENSMUST00000082891 119 ntBASIC19.74■□□□□ 0.75
Usp54Q8BL06 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Abhd6-203ENSMUST00000225234 1958 ntBASIC19.74■□□□□ 0.75
Usp54Q8BL06 Gm45684-201ENSMUST00000210244 1571 ntBASIC19.74■□□□□ 0.75
Usp54Q8BL06 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Gm38158-201ENSMUST00000194617 339 ntBASIC19.74■□□□□ 0.75
Usp54Q8BL06 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
Usp54Q8BL06 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp54Q8BL06 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.74■□□□□ 0.75
Usp54Q8BL06 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Gm15236-201ENSMUST00000117309 379 ntBASIC19.73■□□□□ 0.75
Usp54Q8BL06 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Gm44985-201ENSMUST00000206202 1016 ntBASIC19.73■□□□□ 0.75
Usp54Q8BL06 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp54Q8BL06 Gm10268-201ENSMUST00000085340 555 ntBASIC19.73■□□□□ 0.75
Usp54Q8BL06 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp54Q8BL06 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Gm13342-201ENSMUST00000121055 207 ntBASIC19.72■□□□□ 0.75
Usp54Q8BL06 Gm13786-201ENSMUST00000122371 333 ntBASIC19.72■□□□□ 0.75
Usp54Q8BL06 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Gm6334-201ENSMUST00000207083 228 ntBASIC19.72■□□□□ 0.75
Usp54Q8BL06 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Usp54Q8BL06 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp54Q8BL06 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms