Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Gm10275-202ENSMUST00000168697 495 ntBASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Gm10275-201ENSMUST00000092620 635 ntBASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Gm27702-201ENSMUST00000184512 56 ntBASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn3Q8BHH8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Gm43125-201ENSMUST00000201724 730 ntBASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Chchd1-203ENSMUST00000224633 557 ntBASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clrn3Q8BHH8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms