Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Mir1897-201ENSMUST00000122581 272 ntBASIC13.96□□□□□ -0.17
Ubp1Q811S7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ubp1Q811S7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.96□□□□□ -0.17
Ubp1Q811S7 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.96□□□□□ -0.17
Ubp1Q811S7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ubp1Q811S7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ubp1Q811S7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ubp1Q811S7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ubp1Q811S7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 AA543401-201ENSMUST00000164248 1269 ntBASIC13.95□□□□□ -0.18
Ubp1Q811S7 Gm36991-201ENSMUST00000191800 648 ntBASIC13.95□□□□□ -0.18
Ubp1Q811S7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Gm6888-201ENSMUST00000221983 706 ntBASIC13.95□□□□□ -0.18
Ubp1Q811S7 Dupd1-202ENSMUST00000224735 548 ntBASIC13.95□□□□□ -0.18
Ubp1Q811S7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Mir125a-201ENSMUST00000083545 68 ntBASIC13.95□□□□□ -0.18
Ubp1Q811S7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.95□□□□□ -0.18
Ubp1Q811S7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubp1Q811S7 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.94□□□□□ -0.18
Ubp1Q811S7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Gm44872-201ENSMUST00000207864 420 ntBASIC13.94□□□□□ -0.18
Ubp1Q811S7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubp1Q811S7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Gm13223-201ENSMUST00000118609 747 ntBASIC13.93□□□□□ -0.18
Ubp1Q811S7 Gm15920-201ENSMUST00000118998 402 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms