Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Gm9522-201ENSMUST00000182394 926 ntBASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh8Q7TSK3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Gm10275-202ENSMUST00000168697 495 ntBASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Gm6916-202ENSMUST00000205523 195 ntBASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Gm10275-201ENSMUST00000092620 635 ntBASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.94□□□□□ -0.18
Pcdh8Q7TSK3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Gm33320-201ENSMUST00000192232 530 ntBASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms