Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3d21Q7TSG5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3d21Q7TSG5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Mir449b-201ENSMUST00000104833 80 ntBASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Gm8410-201ENSMUST00000117225 605 ntBASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sh3d21Q7TSG5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3d21Q7TSG5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Gm18766-201ENSMUST00000189811 808 ntBASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Gm42790-201ENSMUST00000201268 969 ntBASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3d21Q7TSG5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sh3d21Q7TSG5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms