Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Exosc3Q7TQK4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Exosc3Q7TQK4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Exosc3Q7TQK4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Exosc3Q7TQK4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gm9229-201ENSMUST00000222777 126 ntBASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Exosc3Q7TQK4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13□□□□□ -0.33
Exosc3Q7TQK4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13□□□□□ -0.33
Exosc3Q7TQK4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Gm27321-201ENSMUST00000185021 205 ntBASIC13□□□□□ -0.33
Exosc3Q7TQK4 Gm33320-201ENSMUST00000192232 530 ntBASIC13□□□□□ -0.33
Exosc3Q7TQK4 AC159114.1-201ENSMUST00000220349 266 ntBASIC13□□□□□ -0.33
Exosc3Q7TQK4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Nupl1-207ENSMUST00000225311 2475 ntBASIC13□□□□□ -0.33
Exosc3Q7TQK4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13□□□□□ -0.33
Exosc3Q7TQK4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Exosc3Q7TQK4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms