Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Gm14140-201ENSMUST00000119999 995 ntBASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd3Q6P9Z1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Gm9385-201ENSMUST00000117563 472 ntBASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd3Q6P9Z1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd3Q6P9Z1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.96□□□□□ -0.34
Smarcd3Q6P9Z1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd3Q6P9Z1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms