Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Gm11618-201ENSMUST00000117946 267 ntBASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Gm8584-201ENSMUST00000171982 758 ntBASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Gm7046-201ENSMUST00000221351 977 ntBASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Gm10146-201ENSMUST00000072739 309 ntBASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Slx4Q6P1D7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Gm12997-201ENSMUST00000120207 640 ntBASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Gm3809-201ENSMUST00000180973 1006 ntBASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Gm7118-201ENSMUST00000200167 1003 ntBASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Gm18753-201ENSMUST00000201000 566 ntBASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slx4Q6P1D7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm12537-201ENSMUST00000119266 1002 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm12070-201ENSMUST00000119551 1002 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm12671-201ENSMUST00000119978 1002 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm13292-201ENSMUST00000120014 1000 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm12403-201ENSMUST00000121384 959 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm10359-201ENSMUST00000180167 1002 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm12033-201ENSMUST00000180654 1002 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm5559-201ENSMUST00000180755 1002 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm4335-201ENSMUST00000182581 1004 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm3756-201ENSMUST00000169182 1355 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Mir5132-201ENSMUST00000175166 71 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gm3695-201ENSMUST00000087222 1009 ntBASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slx4Q6P1D7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Mir698-201ENSMUST00000102164 109 ntBASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Gm6023-201ENSMUST00000118217 606 ntBASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 CT573034.1-201ENSMUST00000222983 313 ntBASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Gm10040-201ENSMUST00000080726 1662 ntBASIC21.35■■□□□ 1.01
Slx4Q6P1D7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Gm5637-201ENSMUST00000153890 1119 ntBASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Rn7sk-201ENSMUST00000083103 331 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms