Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim27Q62158 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim27Q62158 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim27Q62158 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.35■□□□□ 0.37
Trim27Q62158 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim27Q62158 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Trim27Q62158 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim27Q62158 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Trim27Q62158 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Trim27Q62158 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Trim27Q62158 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.34■□□□□ 0.37
Trim27Q62158 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Gm15653-201ENSMUST00000119247 907 ntBASIC17.34■□□□□ 0.37
Trim27Q62158 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim27Q62158 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim27Q62158 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.34■□□□□ 0.37
Trim27Q62158 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim27Q62158 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.34■□□□□ 0.37
Trim27Q62158 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim27Q62158 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.34■□□□□ 0.37
Trim27Q62158 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim27Q62158 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim27Q62158 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim27Q62158 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim27Q62158 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Trim27Q62158 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim27Q62158 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim27Q62158 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim27Q62158 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim27Q62158 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim27Q62158 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim27Q62158 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim27Q62158 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Trim27Q62158 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.33■□□□□ 0.36
Trim27Q62158 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.33■□□□□ 0.36
Trim27Q62158 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.33■□□□□ 0.36
Trim27Q62158 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.33■□□□□ 0.36
Trim27Q62158 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim27Q62158 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim27Q62158 Gm27430-201ENSMUST00000184585 107 ntBASIC17.33■□□□□ 0.36
Trim27Q62158 Gm44333-201ENSMUST00000197168 107 ntBASIC17.33■□□□□ 0.36
Trim27Q62158 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim27Q62158 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Gm46209-201ENSMUST00000217912 553 ntBASIC17.33■□□□□ 0.36
Trim27Q62158 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.33■□□□□ 0.36
Trim27Q62158 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Trim27Q62158 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim27Q62158 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim27Q62158 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.33■□□□□ 0.36
Trim27Q62158 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim27Q62158 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim27Q62158 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.32■□□□□ 0.36
Trim27Q62158 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim27Q62158 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim27Q62158 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Trim27Q62158 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim27Q62158 Gm2445-201ENSMUST00000182798 989 ntBASIC17.32■□□□□ 0.36
Trim27Q62158 Gm43703-201ENSMUST00000200523 763 ntBASIC17.32■□□□□ 0.36
Trim27Q62158 Gm6888-201ENSMUST00000221983 706 ntBASIC17.32■□□□□ 0.36
Trim27Q62158 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim27Q62158 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim27Q62158 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim27Q62158 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim27Q62158 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms