Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.59□□□□□ -0.23
ClpbQ60649 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.59□□□□□ -0.23
ClpbQ60649 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.59□□□□□ -0.23
ClpbQ60649 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ClpbQ60649 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ClpbQ60649 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
ClpbQ60649 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
ClpbQ60649 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ClpbQ60649 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ClpbQ60649 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ClpbQ60649 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ClpbQ60649 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ClpbQ60649 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ClpbQ60649 Gm13015-201ENSMUST00000118674 204 ntBASIC13.58□□□□□ -0.24
ClpbQ60649 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.58□□□□□ -0.24
ClpbQ60649 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.58□□□□□ -0.24
ClpbQ60649 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ClpbQ60649 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.58□□□□□ -0.24
ClpbQ60649 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ClpbQ60649 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ClpbQ60649 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.58□□□□□ -0.24
ClpbQ60649 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClpbQ60649 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.57□□□□□ -0.24
ClpbQ60649 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ClpbQ60649 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ClpbQ60649 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ClpbQ60649 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.57□□□□□ -0.24
ClpbQ60649 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.57□□□□□ -0.24
ClpbQ60649 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ClpbQ60649 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.57□□□□□ -0.24
ClpbQ60649 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ClpbQ60649 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClpbQ60649 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
ClpbQ60649 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.56□□□□□ -0.24
ClpbQ60649 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.56□□□□□ -0.24
ClpbQ60649 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.56□□□□□ -0.24
ClpbQ60649 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClpbQ60649 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms