Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Syt7-205ENSMUST00000224135 1557 ntBASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps54Q5SPW0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Gm5866-201ENSMUST00000177881 973 ntBASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Gm21854-201ENSMUST00000179901 471 ntBASIC16.93■□□□□ 0.3
Vps54Q5SPW0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps54Q5SPW0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Gm22189-201ENSMUST00000103822 86 ntBASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps54Q5SPW0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms