Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Gm14822-201ENSMUST00000122247 291 ntBASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5d-4Q5R1F6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Gm8584-201ENSMUST00000171982 758 ntBASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Gm27397-201ENSMUST00000184997 107 ntBASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms