Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.07□□□□□ -0.48
Fndc4Q3TR08 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Grk6-205ENSMUST00000224653 2976 ntBASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fndc4Q3TR08 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Gm2272-201ENSMUST00000194903 582 ntBASIC12.06□□□□□ -0.48
Fndc4Q3TR08 AW822252-206ENSMUST00000208904 237 ntBASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.06□□□□□ -0.48
Fndc4Q3TR08 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fndc4Q3TR08 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.05□□□□□ -0.48
Fndc4Q3TR08 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Gm12260-201ENSMUST00000122447 411 ntBASIC12.05□□□□□ -0.48
Fndc4Q3TR08 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Gm43514-201ENSMUST00000198852 424 ntBASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fndc4Q3TR08 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms