Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Gm13665-201ENSMUST00000120830 528 ntBASIC12.51□□□□□ -0.41
Chd8Q09XV5 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.51□□□□□ -0.41
Chd8Q09XV5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.51□□□□□ -0.41
Chd8Q09XV5 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.51□□□□□ -0.41
Chd8Q09XV5 Gm12036-201ENSMUST00000120008 530 ntBASIC12.51□□□□□ -0.41
Chd8Q09XV5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Mir6923-201ENSMUST00000184592 72 ntBASIC12.51□□□□□ -0.41
Chd8Q09XV5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd8Q09XV5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.5□□□□□ -0.41
Chd8Q09XV5 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.5□□□□□ -0.41
Chd8Q09XV5 Mir1901-201ENSMUST00000122616 78 ntBASIC12.5□□□□□ -0.41
Chd8Q09XV5 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Gm27772-201ENSMUST00000184900 187 ntBASIC12.5□□□□□ -0.41
Chd8Q09XV5 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Ntng1-201ENSMUST00000051253 327 ntBASIC12.5□□□□□ -0.41
Chd8Q09XV5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chd8Q09XV5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd8Q09XV5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Gm10434-201ENSMUST00000101158 471 ntBASIC12.49□□□□□ -0.41
Chd8Q09XV5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Gm13888-201ENSMUST00000119148 422 ntBASIC12.49□□□□□ -0.41
Chd8Q09XV5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Gm45527-201ENSMUST00000211052 774 ntBASIC12.49□□□□□ -0.41
Chd8Q09XV5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.49□□□□□ -0.41
Chd8Q09XV5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms