Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Gm18889-201ENSMUST00000174284 929 ntBASIC14.21□□□□□ -0.13
Pfdn6Q03958 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Gm2756-201ENSMUST00000195851 400 ntBASIC14.21□□□□□ -0.13
Pfdn6Q03958 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.21□□□□□ -0.13
Pfdn6Q03958 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.21□□□□□ -0.13
Pfdn6Q03958 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfdn6Q03958 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pfdn6Q03958 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.2□□□□□ -0.14
Pfdn6Q03958 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pfdn6Q03958 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.2□□□□□ -0.14
Pfdn6Q03958 Gm12882-201ENSMUST00000121696 517 ntBASIC14.2□□□□□ -0.14
Pfdn6Q03958 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Gm24513-201ENSMUST00000174964 138 ntBASIC14.2□□□□□ -0.14
Pfdn6Q03958 Gm27397-201ENSMUST00000184997 107 ntBASIC14.2□□□□□ -0.14
Pfdn6Q03958 Gm18049-201ENSMUST00000208909 581 ntBASIC14.2□□□□□ -0.14
Pfdn6Q03958 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfdn6Q03958 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.19□□□□□ -0.14
Pfdn6Q03958 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.19□□□□□ -0.14
Pfdn6Q03958 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms