Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.59□□□□□ -0.39
H3f3aP84244 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.59□□□□□ -0.39
H3f3aP84244 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
H3f3aP84244 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
H3f3aP84244 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H3f3aP84244 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H3f3aP84244 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.59□□□□□ -0.39
H3f3aP84244 Gm14767-201ENSMUST00000121559 586 ntBASIC12.59□□□□□ -0.39
H3f3aP84244 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 AA543401-201ENSMUST00000164248 1269 ntBASIC12.59□□□□□ -0.39
H3f3aP84244 Gm27321-201ENSMUST00000185021 205 ntBASIC12.59□□□□□ -0.39
H3f3aP84244 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.59□□□□□ -0.39
H3f3aP84244 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.59□□□□□ -0.39
H3f3aP84244 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H3f3aP84244 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
H3f3aP84244 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.59□□□□□ -0.39
H3f3aP84244 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.59□□□□□ -0.39
H3f3aP84244 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H3f3aP84244 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H3f3aP84244 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.58□□□□□ -0.39
H3f3aP84244 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.58□□□□□ -0.39
H3f3aP84244 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
H3f3aP84244 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.58□□□□□ -0.4
H3f3aP84244 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H3f3aP84244 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.58□□□□□ -0.4
H3f3aP84244 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H3f3aP84244 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.58□□□□□ -0.4
H3f3aP84244 Gm6888-201ENSMUST00000221983 706 ntBASIC12.58□□□□□ -0.4
H3f3aP84244 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.58□□□□□ -0.4
H3f3aP84244 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.58□□□□□ -0.4
H3f3aP84244 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H3f3aP84244 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.58□□□□□ -0.4
H3f3aP84244 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.58□□□□□ -0.4
H3f3aP84244 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.58□□□□□ -0.4
H3f3aP84244 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.58□□□□□ -0.4
H3f3aP84244 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H3f3aP84244 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.58□□□□□ -0.4
H3f3aP84244 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H3f3aP84244 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
H3f3aP84244 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
H3f3aP84244 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
H3f3aP84244 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
H3f3aP84244 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.57□□□□□ -0.4
H3f3aP84244 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Gm17837-201ENSMUST00000186435 985 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms