Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SgcaP82350 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
SgcaP82350 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.85□□□□□ -0.51
SgcaP82350 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SgcaP82350 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.85□□□□□ -0.51
SgcaP82350 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.85□□□□□ -0.51
SgcaP82350 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Gm27704-201ENSMUST00000185094 107 ntBASIC11.85□□□□□ -0.51
SgcaP82350 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SgcaP82350 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.85□□□□□ -0.51
SgcaP82350 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SgcaP82350 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SgcaP82350 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
SgcaP82350 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.85□□□□□ -0.51
SgcaP82350 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Grk6-205ENSMUST00000224653 2976 ntBASIC11.85□□□□□ -0.51
SgcaP82350 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SgcaP82350 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.84□□□□□ -0.51
SgcaP82350 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.84□□□□□ -0.51
SgcaP82350 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.84□□□□□ -0.51
SgcaP82350 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.84□□□□□ -0.51
SgcaP82350 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Gm12644-201ENSMUST00000119935 606 ntBASIC11.84□□□□□ -0.51
SgcaP82350 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.84□□□□□ -0.51
SgcaP82350 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.84□□□□□ -0.51
SgcaP82350 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.84□□□□□ -0.51
SgcaP82350 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.84□□□□□ -0.51
SgcaP82350 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.84□□□□□ -0.51
SgcaP82350 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.84□□□□□ -0.51
SgcaP82350 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SgcaP82350 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.84□□□□□ -0.51
SgcaP82350 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcaP82350 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SgcaP82350 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
SgcaP82350 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
SgcaP82350 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SgcaP82350 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
SgcaP82350 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
SgcaP82350 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
SgcaP82350 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms