Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.15□□□□□ -0.14
Lim2P56563 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Gm44344-201ENSMUST00000200287 129 ntBASIC14.15□□□□□ -0.14
Lim2P56563 Gm20949-201ENSMUST00000206478 952 ntBASIC14.15□□□□□ -0.14
Lim2P56563 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.15□□□□□ -0.14
Lim2P56563 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Mir125a-201ENSMUST00000083545 68 ntBASIC14.15□□□□□ -0.14
Lim2P56563 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 BC001981-202ENSMUST00000191393 1545 ntBASIC14.15□□□□□ -0.14
Lim2P56563 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lim2P56563 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lim2P56563 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Lim2P56563 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lim2P56563 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.14□□□□□ -0.15
Lim2P56563 Gm12428-201ENSMUST00000119844 727 ntBASIC14.14□□□□□ -0.15
Lim2P56563 Gm12882-201ENSMUST00000121696 517 ntBASIC14.14□□□□□ -0.15
Lim2P56563 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.14□□□□□ -0.15
Lim2P56563 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Lim2P56563 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.14□□□□□ -0.15
Lim2P56563 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.14□□□□□ -0.15
Lim2P56563 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lim2P56563 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lim2P56563 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lim2P56563 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.14□□□□□ -0.15
Lim2P56563 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.13□□□□□ -0.15
Lim2P56563 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.13□□□□□ -0.15
Lim2P56563 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lim2P56563 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lim2P56563 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.13□□□□□ -0.15
Lim2P56563 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Gm27306-201ENSMUST00000183970 107 ntBASIC14.13□□□□□ -0.15
Lim2P56563 Gm27680-201ENSMUST00000184192 160 ntBASIC14.13□□□□□ -0.15
Lim2P56563 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lim2P56563 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lim2P56563 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lim2P56563 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.13□□□□□ -0.15
Lim2P56563 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.13□□□□□ -0.15
Lim2P56563 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.13□□□□□ -0.15
Lim2P56563 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lim2P56563 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lim2P56563 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lim2P56563 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms