Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Pdx1P52946 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.99□□□□□ -0.17
Pdx1P52946 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.99□□□□□ -0.17
Pdx1P52946 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Pdx1P52946 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.98□□□□□ -0.17
Pdx1P52946 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 AA543401-201ENSMUST00000164248 1269 ntBASIC13.98□□□□□ -0.17
Pdx1P52946 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.98□□□□□ -0.17
Pdx1P52946 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.98□□□□□ -0.17
Pdx1P52946 Gm6916-202ENSMUST00000205523 195 ntBASIC13.98□□□□□ -0.17
Pdx1P52946 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.98□□□□□ -0.17
Pdx1P52946 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.98□□□□□ -0.17
Pdx1P52946 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.98□□□□□ -0.17
Pdx1P52946 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.98□□□□□ -0.17
Pdx1P52946 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.98□□□□□ -0.17
Pdx1P52946 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pdx1P52946 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pdx1P52946 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdx1P52946 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.98□□□□□ -0.17
Pdx1P52946 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pdx1P52946 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pdx1P52946 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.97□□□□□ -0.17
Pdx1P52946 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pdx1P52946 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.97□□□□□ -0.17
Pdx1P52946 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.97□□□□□ -0.17
Pdx1P52946 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.97□□□□□ -0.17
Pdx1P52946 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pdx1P52946 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.97□□□□□ -0.17
Pdx1P52946 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.97□□□□□ -0.17
Pdx1P52946 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.97□□□□□ -0.17
Pdx1P52946 Gm46209-201ENSMUST00000217912 553 ntBASIC13.97□□□□□ -0.17
Pdx1P52946 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.97□□□□□ -0.17
Pdx1P52946 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Pdx1P52946 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdx1P52946 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Pdx1P52946 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.96□□□□□ -0.17
Pdx1P52946 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.96□□□□□ -0.17
Pdx1P52946 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.96□□□□□ -0.17
Pdx1P52946 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.96□□□□□ -0.17
Pdx1P52946 Gm44608-201ENSMUST00000206827 855 ntBASIC13.96□□□□□ -0.17
Pdx1P52946 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pdx1P52946 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pdx1P52946 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pdx1P52946 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Pdx1P52946 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Pdx1P52946 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms