Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClgnP52194 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClgnP52194 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClgnP52194 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
ClgnP52194 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.44□□□□□ -0.1
ClgnP52194 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.43□□□□□ -0.1
ClgnP52194 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.43□□□□□ -0.1
ClgnP52194 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.43□□□□□ -0.1
ClgnP52194 Gm24513-201ENSMUST00000174964 138 ntBASIC14.43□□□□□ -0.1
ClgnP52194 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.43□□□□□ -0.1
ClgnP52194 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.43□□□□□ -0.1
ClgnP52194 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ClgnP52194 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.43□□□□□ -0.1
ClgnP52194 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ClgnP52194 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
ClgnP52194 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ClgnP52194 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.42□□□□□ -0.1
ClgnP52194 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.42□□□□□ -0.1
ClgnP52194 Gm15483-201ENSMUST00000120338 456 ntBASIC14.42□□□□□ -0.1
ClgnP52194 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
ClgnP52194 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.42□□□□□ -0.1
ClgnP52194 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClgnP52194 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.42□□□□□ -0.1
ClgnP52194 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.41□□□□□ -0.1
ClgnP52194 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ClgnP52194 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.41□□□□□ -0.1
ClgnP52194 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
ClgnP52194 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ClgnP52194 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ClgnP52194 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.41□□□□□ -0.1
ClgnP52194 Gm23547-201ENSMUST00000158210 271 ntBASIC14.41□□□□□ -0.1
ClgnP52194 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.41□□□□□ -0.1
ClgnP52194 Gm27397-201ENSMUST00000184997 107 ntBASIC14.41□□□□□ -0.1
ClgnP52194 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.41□□□□□ -0.1
ClgnP52194 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.41□□□□□ -0.1
ClgnP52194 Gm37230-201ENSMUST00000194491 818 ntBASIC14.41□□□□□ -0.1
ClgnP52194 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms