Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.3□□□□□ -0.12
Lhx3P50481 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.3□□□□□ -0.12
Lhx3P50481 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.3□□□□□ -0.12
Lhx3P50481 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lhx3P50481 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx3P50481 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lhx3P50481 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx3P50481 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx3P50481 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx3P50481 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lhx3P50481 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx3P50481 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx3P50481 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx3P50481 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx3P50481 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.29□□□□□ -0.12
Lhx3P50481 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lhx3P50481 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Lhx3P50481 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Gm6218-201ENSMUST00000219812 628 ntBASIC14.29□□□□□ -0.12
Lhx3P50481 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.29□□□□□ -0.12
Lhx3P50481 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Gm9797-201ENSMUST00000052902 613 ntBASIC14.29□□□□□ -0.12
Lhx3P50481 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx3P50481 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx3P50481 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.29□□□□□ -0.12
Lhx3P50481 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Lhx3P50481 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.29□□□□□ -0.12
Lhx3P50481 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Lhx3P50481 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx3P50481 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lhx3P50481 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.28□□□□□ -0.12
Lhx3P50481 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.28□□□□□ -0.12
Lhx3P50481 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lhx3P50481 Gm5866-201ENSMUST00000177881 973 ntBASIC14.28□□□□□ -0.12
Lhx3P50481 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lhx3P50481 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lhx3P50481 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.28□□□□□ -0.12
Lhx3P50481 Gm29741-201ENSMUST00000192667 421 ntBASIC14.28□□□□□ -0.12
Lhx3P50481 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.28□□□□□ -0.12
Lhx3P50481 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.28□□□□□ -0.12
Lhx3P50481 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.28□□□□□ -0.12
Lhx3P50481 Syt7-205ENSMUST00000224135 1557 ntBASIC14.28□□□□□ -0.12
Lhx3P50481 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.28□□□□□ -0.12
Lhx3P50481 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lhx3P50481 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lhx3P50481 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lhx3P50481 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx3P50481 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx3P50481 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx3P50481 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx3P50481 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx3P50481 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx3P50481 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx3P50481 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.27□□□□□ -0.13
Lhx3P50481 Gm15240-201ENSMUST00000118156 720 ntBASIC14.27□□□□□ -0.13
Lhx3P50481 Gm13385-201ENSMUST00000121089 220 ntBASIC14.27□□□□□ -0.13
Lhx3P50481 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.27□□□□□ -0.13
Lhx3P50481 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx3P50481 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx3P50481 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.27□□□□□ -0.13
Lhx3P50481 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.27□□□□□ -0.13
Lhx3P50481 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.27□□□□□ -0.13
Lhx3P50481 Gm42612-201ENSMUST00000197986 623 ntBASIC14.27□□□□□ -0.13
Lhx3P50481 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms