Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LtbrP50284 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LtbrP50284 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LtbrP50284 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.57■□□□□ 0.24
LtbrP50284 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LtbrP50284 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.57■□□□□ 0.24
LtbrP50284 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Gm13464-201ENSMUST00000119418 935 ntBASIC16.57■□□□□ 0.24
LtbrP50284 Gm11814-201ENSMUST00000119515 929 ntBASIC16.57■□□□□ 0.24
LtbrP50284 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.57■□□□□ 0.24
LtbrP50284 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.57■□□□□ 0.24
LtbrP50284 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC16.57■□□□□ 0.24
LtbrP50284 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LtbrP50284 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LtbrP50284 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.57■□□□□ 0.24
LtbrP50284 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LtbrP50284 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.57■□□□□ 0.24
LtbrP50284 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.56■□□□□ 0.24
LtbrP50284 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LtbrP50284 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
LtbrP50284 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LtbrP50284 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LtbrP50284 Gm8652-201ENSMUST00000181363 964 ntBASIC16.56■□□□□ 0.24
LtbrP50284 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.56■□□□□ 0.24
LtbrP50284 Gm2495-201ENSMUST00000191160 466 ntBASIC16.56■□□□□ 0.24
LtbrP50284 Gm2451-201ENSMUST00000199447 999 ntBASIC16.56■□□□□ 0.24
LtbrP50284 Gm10290-201ENSMUST00000200451 999 ntBASIC16.56■□□□□ 0.24
LtbrP50284 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.56■□□□□ 0.24
LtbrP50284 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Gm6091-201ENSMUST00000098307 165 ntBASIC16.56■□□□□ 0.24
LtbrP50284 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.56■□□□□ 0.24
LtbrP50284 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.56■□□□□ 0.24
LtbrP50284 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LtbrP50284 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LtbrP50284 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.55■□□□□ 0.24
LtbrP50284 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.55■□□□□ 0.24
LtbrP50284 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
LtbrP50284 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LtbrP50284 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LtbrP50284 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Gm12134-201ENSMUST00000122109 520 ntBASIC16.55■□□□□ 0.24
LtbrP50284 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.55■□□□□ 0.24
LtbrP50284 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Gm27243-201ENSMUST00000183964 521 ntBASIC16.55■□□□□ 0.24
LtbrP50284 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.55■□□□□ 0.24
LtbrP50284 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.55■□□□□ 0.24
LtbrP50284 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.55■□□□□ 0.24
LtbrP50284 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.55■□□□□ 0.24
LtbrP50284 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LtbrP50284 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LtbrP50284 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.55■□□□□ 0.24
LtbrP50284 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LtbrP50284 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LtbrP50284 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LtbrP50284 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LtbrP50284 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms