Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Brca1P48754 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Brca1P48754 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Brca1P48754 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Brca1P48754 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.58■□□□□ 0.08
Brca1P48754 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Brca1P48754 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Brca1P48754 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.57■□□□□ 0.08
Brca1P48754 Gm37922-201ENSMUST00000195596 455 ntBASIC15.57■□□□□ 0.08
Brca1P48754 Gm42550-201ENSMUST00000201553 960 ntBASIC15.57■□□□□ 0.08
Brca1P48754 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.57■□□□□ 0.08
Brca1P48754 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Brca1P48754 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.57■□□□□ 0.08
Brca1P48754 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Brca1P48754 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.57■□□□□ 0.08
Brca1P48754 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.57■□□□□ 0.08
Brca1P48754 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.57■□□□□ 0.08
Brca1P48754 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Brca1P48754 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Brca1P48754 Gm14381-201ENSMUST00000122105 414 ntBASIC15.57■□□□□ 0.08
Brca1P48754 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.57■□□□□ 0.08
Brca1P48754 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.57■□□□□ 0.08
Brca1P48754 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.57■□□□□ 0.08
Brca1P48754 Gm6082-201ENSMUST00000215204 454 ntBASIC15.57■□□□□ 0.08
Brca1P48754 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Brca1P48754 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.56■□□□□ 0.08
Brca1P48754 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.56■□□□□ 0.08
Brca1P48754 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Brca1P48754 Gm43138-201ENSMUST00000199123 708 ntBASIC15.56■□□□□ 0.08
Brca1P48754 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.56■□□□□ 0.08
Brca1P48754 Gm7046-201ENSMUST00000221351 977 ntBASIC15.56■□□□□ 0.08
Brca1P48754 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Brca1P48754 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.56■□□□□ 0.08
Brca1P48754 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Brca1P48754 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.56■□□□□ 0.08
Brca1P48754 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Brca1P48754 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
Brca1P48754 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Brca1P48754 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.55■□□□□ 0.08
Brca1P48754 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.55■□□□□ 0.08
Brca1P48754 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.55■□□□□ 0.08
Brca1P48754 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.55■□□□□ 0.08
Brca1P48754 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Brca1P48754 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.55■□□□□ 0.08
Brca1P48754 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.55■□□□□ 0.08
Brca1P48754 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Brca1P48754 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.55■□□□□ 0.08
Brca1P48754 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Brca1P48754 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Brca1P48754 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.54■□□□□ 0.08
Brca1P48754 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.54■□□□□ 0.08
Brca1P48754 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Brca1P48754 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Brca1P48754 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.54■□□□□ 0.08
Brca1P48754 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Brca1P48754 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms