Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Gm18027-201ENSMUST00000218947 619 ntBASIC12.97□□□□□ -0.33
Nkx2-2P42586 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nkx2-2P42586 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.96□□□□□ -0.33
Nkx2-2P42586 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.96□□□□□ -0.33
Nkx2-2P42586 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nkx2-2P42586 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-2P42586 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.96□□□□□ -0.34
Nkx2-2P42586 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-2P42586 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-2P42586 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-2P42586 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-2P42586 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-2P42586 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-2P42586 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-2P42586 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-2P42586 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Gm33320-201ENSMUST00000192232 530 ntBASIC12.95□□□□□ -0.34
Nkx2-2P42586 Gm37714-201ENSMUST00000194742 342 ntBASIC12.95□□□□□ -0.34
Nkx2-2P42586 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.95□□□□□ -0.34
Nkx2-2P42586 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-2P42586 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.94□□□□□ -0.34
Nkx2-2P42586 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms