Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.08□□□□□ -0.16
LdlrP35951 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LdlrP35951 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LdlrP35951 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LdlrP35951 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LdlrP35951 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
LdlrP35951 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LdlrP35951 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.07□□□□□ -0.16
LdlrP35951 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LdlrP35951 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.07□□□□□ -0.16
LdlrP35951 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.07□□□□□ -0.16
LdlrP35951 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.07□□□□□ -0.16
LdlrP35951 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.07□□□□□ -0.16
LdlrP35951 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LdlrP35951 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.07□□□□□ -0.16
LdlrP35951 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.07□□□□□ -0.16
LdlrP35951 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LdlrP35951 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Gm11745-201ENSMUST00000121669 448 ntBASIC14.06□□□□□ -0.16
LdlrP35951 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Mir6990-201ENSMUST00000183724 91 ntBASIC14.06□□□□□ -0.16
LdlrP35951 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.06□□□□□ -0.16
LdlrP35951 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.06□□□□□ -0.16
LdlrP35951 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.06□□□□□ -0.16
LdlrP35951 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.06□□□□□ -0.16
LdlrP35951 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LdlrP35951 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
LdlrP35951 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LdlrP35951 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LdlrP35951 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LdlrP35951 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.05□□□□□ -0.16
LdlrP35951 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.05□□□□□ -0.16
LdlrP35951 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LdlrP35951 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms