Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm37424-201ENSMUST00000191727 561 ntBASIC12.43□□□□□ -0.42
Ccl3P10855 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.43□□□□□ -0.42
Ccl3P10855 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.43□□□□□ -0.42
Ccl3P10855 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.43□□□□□ -0.42
Ccl3P10855 Gm10478-201ENSMUST00000084451 396 ntBASIC12.43□□□□□ -0.42
Ccl3P10855 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccl3P10855 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccl3P10855 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.43□□□□□ -0.42
Ccl3P10855 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl3P10855 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccl3P10855 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.42□□□□□ -0.42
Ccl3P10855 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccl3P10855 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccl3P10855 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccl3P10855 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccl3P10855 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccl3P10855 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Ccl3P10855 Gm15371-201ENSMUST00000117057 784 ntBASIC12.42□□□□□ -0.42
Ccl3P10855 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccl3P10855 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ccl3P10855 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Gm29649-201ENSMUST00000185649 419 ntBASIC12.42□□□□□ -0.42
Ccl3P10855 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccl3P10855 Gm42693-201ENSMUST00000196779 631 ntBASIC12.42□□□□□ -0.42
Ccl3P10855 Gm38671-201ENSMUST00000200573 130 ntBASIC12.42□□□□□ -0.42
Ccl3P10855 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccl3P10855 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccl3P10855 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl3P10855 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccl3P10855 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccl3P10855 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.41□□□□□ -0.42
Ccl3P10855 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Ccl3P10855 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccl3P10855 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Ccl3P10855 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccl3P10855 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccl3P10855 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.41□□□□□ -0.42
Ccl3P10855 Gm29127-201ENSMUST00000188304 517 ntBASIC12.41□□□□□ -0.42
Ccl3P10855 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccl3P10855 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.41□□□□□ -0.42
Ccl3P10855 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.41□□□□□ -0.42
Ccl3P10855 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccl3P10855 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccl3P10855 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms