Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Ccl1P10146 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl1P10146 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl1P10146 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl1P10146 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl1P10146 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl1P10146 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccl1P10146 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ccl1P10146 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccl1P10146 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccl1P10146 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Gm18489-201ENSMUST00000172565 551 ntBASIC10.95□□□□□ -0.66
Ccl1P10146 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Gm27742-201ENSMUST00000184667 60 ntBASIC10.95□□□□□ -0.66
Ccl1P10146 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.95□□□□□ -0.66
Ccl1P10146 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Gm18041-201ENSMUST00000218210 618 ntBASIC10.95□□□□□ -0.66
Ccl1P10146 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.95□□□□□ -0.66
Ccl1P10146 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccl1P10146 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccl1P10146 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Ccl1P10146 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccl1P10146 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Ccl1P10146 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.95□□□□□ -0.66
Ccl1P10146 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl1P10146 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.94□□□□□ -0.66
Ccl1P10146 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.94□□□□□ -0.66
Ccl1P10146 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ccl1P10146 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.94□□□□□ -0.66
Ccl1P10146 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.94□□□□□ -0.66
Ccl1P10146 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ccl1P10146 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl1P10146 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl1P10146 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl1P10146 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.93□□□□□ -0.66
Ccl1P10146 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl1P10146 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ccl1P10146 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ccl1P10146 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
Ccl1P10146 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms