Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Gm45384-201ENSMUST00000210451 277 ntBASIC14.37□□□□□ -0.11
Rc3h2P0C090 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h2P0C090 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.36□□□□□ -0.11
Rc3h2P0C090 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h2P0C090 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Gm5425-201ENSMUST00000214125 459 ntBASIC14.35□□□□□ -0.11
Rc3h2P0C090 Gm17795-201ENSMUST00000214505 757 ntBASIC14.35□□□□□ -0.11
Rc3h2P0C090 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.35□□□□□ -0.11
Rc3h2P0C090 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.35□□□□□ -0.11
Rc3h2P0C090 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h2P0C090 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms