Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC20.94■□□□□ 0.94
NclP09405 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC20.94■□□□□ 0.94
NclP09405 Gm18624-201ENSMUST00000220966 658 ntBASIC20.94■□□□□ 0.94
NclP09405 AC139350.3-201ENSMUST00000226151 420 ntBASIC20.94■□□□□ 0.94
NclP09405 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC20.94■□□□□ 0.94
NclP09405 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Gm4081-201ENSMUST00000195287 1838 ntBASIC20.94■□□□□ 0.94
NclP09405 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
NclP09405 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC20.94■□□□□ 0.94
NclP09405 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC20.93■□□□□ 0.94
NclP09405 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NclP09405 Ldha-ps-201ENSMUST00000119390 995 ntBASIC20.93■□□□□ 0.94
NclP09405 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC20.93■□□□□ 0.94
NclP09405 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.93■□□□□ 0.94
NclP09405 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NclP09405 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 Gm9115-201ENSMUST00000120192 1348 ntBASIC20.93■□□□□ 0.94
NclP09405 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NclP09405 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NclP09405 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NclP09405 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
NclP09405 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC20.93■□□□□ 0.94
NclP09405 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NclP09405 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
NclP09405 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NclP09405 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NclP09405 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC20.92■□□□□ 0.94
NclP09405 Mir6392-201ENSMUST00000184924 108 ntBASIC20.92■□□□□ 0.94
NclP09405 Gm37714-201ENSMUST00000194742 342 ntBASIC20.92■□□□□ 0.94
NclP09405 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NclP09405 Gm9109-201ENSMUST00000120254 1405 ntBASIC20.92■□□□□ 0.94
NclP09405 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Fbxl12-205ENSMUST00000140702 1555 ntBASIC20.92■□□□□ 0.94
NclP09405 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC20.92■□□□□ 0.94
NclP09405 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC20.92■□□□□ 0.94
NclP09405 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NclP09405 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
NclP09405 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NclP09405 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Gm5354-201ENSMUST00000182417 973 ntBASIC20.91■□□□□ 0.94
NclP09405 Gm37297-201ENSMUST00000192974 2384 ntBASIC20.91■□□□□ 0.94
NclP09405 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Gm9908-201ENSMUST00000211534 448 ntBASIC20.91■□□□□ 0.94
NclP09405 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
NclP09405 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NclP09405 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NclP09405 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
NclP09405 Gm9856-201ENSMUST00000217077 2578 ntBASIC20.91■□□□□ 0.94
NclP09405 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NclP09405 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NclP09405 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NclP09405 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NclP09405 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NclP09405 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NclP09405 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NclP09405 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NclP09405 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms