Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ApoeP08226 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ApoeP08226 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ApoeP08226 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.38□□□□□ -0.27
ApoeP08226 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ApoeP08226 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Gm5479-201ENSMUST00000160578 435 ntBASIC13.38□□□□□ -0.27
ApoeP08226 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.38□□□□□ -0.27
ApoeP08226 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.38□□□□□ -0.27
ApoeP08226 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
ApoeP08226 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
ApoeP08226 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ApoeP08226 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
ApoeP08226 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.38□□□□□ -0.27
ApoeP08226 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
ApoeP08226 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.38□□□□□ -0.27
ApoeP08226 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.38□□□□□ -0.27
ApoeP08226 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ApoeP08226 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ApoeP08226 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.37□□□□□ -0.27
ApoeP08226 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Grk6-205ENSMUST00000224653 2976 ntBASIC13.37□□□□□ -0.27
ApoeP08226 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.37□□□□□ -0.27
ApoeP08226 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ApoeP08226 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ApoeP08226 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.37□□□□□ -0.27
ApoeP08226 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.37□□□□□ -0.27
ApoeP08226 AV026068-213ENSMUST00000223675 1171 ntBASIC13.37□□□□□ -0.27
ApoeP08226 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.37□□□□□ -0.27
ApoeP08226 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
ApoeP08226 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ApoeP08226 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ApoeP08226 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ApoeP08226 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ApoeP08226 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ApoeP08226 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.37□□□□□ -0.27
ApoeP08226 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.37□□□□□ -0.27
ApoeP08226 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.37□□□□□ -0.27
ApoeP08226 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ApoeP08226 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ApoeP08226 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.36□□□□□ -0.27
ApoeP08226 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms