Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cl1O35188 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Gm27533-201ENSMUST00000183800 152 ntBASIC13.31□□□□□ -0.28
Cx3cl1O35188 AA619741-201ENSMUST00000195095 646 ntBASIC13.31□□□□□ -0.28
Cx3cl1O35188 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.31□□□□□ -0.28
Cx3cl1O35188 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.31□□□□□ -0.28
Cx3cl1O35188 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cl1O35188 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.3□□□□□ -0.28
Cx3cl1O35188 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.3□□□□□ -0.28
Cx3cl1O35188 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.3□□□□□ -0.28
Cx3cl1O35188 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cl1O35188 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.29□□□□□ -0.28
Cx3cl1O35188 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.29□□□□□ -0.28
Cx3cl1O35188 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gm12882-201ENSMUST00000121696 517 ntBASIC13.29□□□□□ -0.28
Cx3cl1O35188 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gm17837-201ENSMUST00000186435 985 ntBASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gm38294-201ENSMUST00000192831 381 ntBASIC13.29□□□□□ -0.28
Cx3cl1O35188 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gm16476-201ENSMUST00000221544 139 ntBASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gm6888-201ENSMUST00000221983 706 ntBASIC13.29□□□□□ -0.28
Cx3cl1O35188 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms