Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm27516-201ENSMUST00000184237 98 ntBASIC21.35■■□□□ 1.01
Polr1aO35134 Gm5850-201ENSMUST00000192923 1206 ntBASIC21.35■■□□□ 1.01
Polr1aO35134 Gm37259-201ENSMUST00000193903 849 ntBASIC21.35■■□□□ 1.01
Polr1aO35134 Gm4959-201ENSMUST00000197271 1044 ntBASIC21.35■■□□□ 1.01
Polr1aO35134 Gm7783-201ENSMUST00000204795 781 ntBASIC21.35■■□□□ 1.01
Polr1aO35134 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Polr1aO35134 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC21.35■■□□□ 1.01
Polr1aO35134 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC21.35■■□□□ 1.01
Polr1aO35134 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Polr1aO35134 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC21.35■■□□□ 1.01
Polr1aO35134 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC21.35■■□□□ 1.01
Polr1aO35134 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Gm26083-201ENSMUST00000157904 193 ntBASIC21.35■■□□□ 1.01
Polr1aO35134 Gm38341-201ENSMUST00000195357 515 ntBASIC21.35■■□□□ 1.01
Polr1aO35134 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC21.35■■□□□ 1.01
Polr1aO35134 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Polr1aO35134 AC162938.1-201ENSMUST00000213140 2323 ntBASIC21.34■■□□□ 1.01
Polr1aO35134 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC21.34■■□□□ 1.01
Polr1aO35134 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Polr1aO35134 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC21.34■■□□□ 1.01
Polr1aO35134 Gm12329-201ENSMUST00000120829 1007 ntBASIC21.34■■□□□ 1.01
Polr1aO35134 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC21.34■■□□□ 1.01
Polr1aO35134 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC21.34■■□□□ 1.01
Polr1aO35134 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC21.34■■□□□ 1.01
Polr1aO35134 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Polr1aO35134 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr1aO35134 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Polr1aO35134 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Polr1aO35134 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Polr1aO35134 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Polr1aO35134 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Polr1aO35134 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Polr1aO35134 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Polr1aO35134 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC21.33■■□□□ 1.01
Polr1aO35134 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC21.33■■□□□ 1.01
Polr1aO35134 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC21.33■■□□□ 1.01
Polr1aO35134 Gm10268-201ENSMUST00000085340 555 ntBASIC21.33■■□□□ 1.01
Polr1aO35134 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Polr1aO35134 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Polr1aO35134 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Polr1aO35134 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Polr1aO35134 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Polr1aO35134 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Polr1aO35134 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Polr1aO35134 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC21.33■■□□□ 1
Polr1aO35134 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Polr1aO35134 Gm11658-201ENSMUST00000120913 1008 ntBASIC21.32■■□□□ 1
Polr1aO35134 Gm13786-201ENSMUST00000122371 333 ntBASIC21.32■■□□□ 1
Polr1aO35134 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC21.32■■□□□ 1
Polr1aO35134 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC21.32■■□□□ 1
Polr1aO35134 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 Gm2467-201ENSMUST00000182266 1010 ntBASIC21.32■■□□□ 1
Polr1aO35134 Gm6981-201ENSMUST00000182467 1008 ntBASIC21.32■■□□□ 1
Polr1aO35134 Gm38241-201ENSMUST00000192641 898 ntBASIC21.32■■□□□ 1
Polr1aO35134 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC21.32■■□□□ 1
Polr1aO35134 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC21.32■■□□□ 1
Polr1aO35134 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC21.32■■□□□ 1
Polr1aO35134 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Polr1aO35134 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
Polr1aO35134 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC21.32■■□□□ 1
Polr1aO35134 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC21.32■■□□□ 1
Polr1aO35134 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr1aO35134 Gm3695-201ENSMUST00000087222 1009 ntBASIC21.32■■□□□ 1
Polr1aO35134 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms