Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Gm12428-201ENSMUST00000119844 727 ntBASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Gm12882-201ENSMUST00000121696 517 ntBASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.81□□□□□ -0.68
Gm10553J3QPF1 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10553J3QPF1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gm6916-202ENSMUST00000205523 195 ntBASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gm9063-201ENSMUST00000223299 582 ntBASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm10553J3QPF1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Gm27306-201ENSMUST00000183970 107 ntBASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Gm10553J3QPF1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms