Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Gm15427-201ENSMUST00000117288 531 ntBASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28043E0CXC2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm28043E0CXC2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Gm9385-201ENSMUST00000117563 472 ntBASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm28043E0CXC2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms