Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Shank1D3YZU1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Shank1D3YZU1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Shank1D3YZU1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Gm27514-201ENSMUST00000183692 110 ntBASIC12.64□□□□□ -0.39
Shank1D3YZU1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.64□□□□□ -0.39
Shank1D3YZU1 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.64□□□□□ -0.39
Shank1D3YZU1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.64□□□□□ -0.39
Shank1D3YZU1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Gm24644-201ENSMUST00000157114 139 ntBASIC12.64□□□□□ -0.39
Shank1D3YZU1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Gm8652-201ENSMUST00000181363 964 ntBASIC12.64□□□□□ -0.39
Shank1D3YZU1 Mir8109-201ENSMUST00000184375 117 ntBASIC12.64□□□□□ -0.39
Shank1D3YZU1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.64□□□□□ -0.39
Shank1D3YZU1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shank1D3YZU1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm7287-201ENSMUST00000205267 602 ntBASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.63□□□□□ -0.39
Shank1D3YZU1 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.63□□□□□ -0.39
Shank1D3YZU1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms