Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 Gm9908-201ENSMUST00000211534 448 ntBASIC13.82□□□□□ -0.2
Chd3B1AR17 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.82□□□□□ -0.2
Chd3B1AR17 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 Gm6180-201ENSMUST00000065243 498 ntBASIC13.82□□□□□ -0.2
Chd3B1AR17 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.82□□□□□ -0.2
Chd3B1AR17 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chd3B1AR17 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chd3B1AR17 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chd3B1AR17 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd3B1AR17 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.81□□□□□ -0.2
Chd3B1AR17 Mir497b-201ENSMUST00000093601 125 ntBASIC13.81□□□□□ -0.2
Chd3B1AR17 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Gm12341-201ENSMUST00000119724 503 ntBASIC13.81□□□□□ -0.2
Chd3B1AR17 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Gm23984-201ENSMUST00000157139 203 ntBASIC13.81□□□□□ -0.2
Chd3B1AR17 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.81□□□□□ -0.2
Chd3B1AR17 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd3B1AR17 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.81□□□□□ -0.2
Chd3B1AR17 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chd3B1AR17 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.8□□□□□ -0.2
Chd3B1AR17 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.8□□□□□ -0.2
Chd3B1AR17 Gm28631-201ENSMUST00000190740 334 ntBASIC13.8□□□□□ -0.2
Chd3B1AR17 Gm18905-201ENSMUST00000205454 928 ntBASIC13.8□□□□□ -0.2
Chd3B1AR17 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.8□□□□□ -0.2
Chd3B1AR17 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.8□□□□□ -0.2
Chd3B1AR17 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.8□□□□□ -0.2
Chd3B1AR17 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chd3B1AR17 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.8□□□□□ -0.2
Chd3B1AR17 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Chd3B1AR17 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chd3B1AR17 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chd3B1AR17 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chd3B1AR17 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.79□□□□□ -0.2
Chd3B1AR17 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.79□□□□□ -0.2
Chd3B1AR17 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.79□□□□□ -0.2
Chd3B1AR17 Gm45384-201ENSMUST00000210451 277 ntBASIC13.79□□□□□ -0.2
Chd3B1AR17 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms