Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
PdfS4R2K0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
PdfS4R2K0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.88□□□□□ -0.67
PdfS4R2K0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PdfS4R2K0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.87□□□□□ -0.67
PdfS4R2K0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.87□□□□□ -0.67
PdfS4R2K0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.87□□□□□ -0.67
PdfS4R2K0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.87□□□□□ -0.67
PdfS4R2K0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.87□□□□□ -0.67
PdfS4R2K0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.87□□□□□ -0.67
PdfS4R2K0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PdfS4R2K0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.86□□□□□ -0.67
PdfS4R2K0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Gm11780-201ENSMUST00000136880 516 ntBASIC10.86□□□□□ -0.67
PdfS4R2K0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms