Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Mrpl40Q9Z2Q5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.21□□□□□ -0.14
Mrpl40Q9Z2Q5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm27989-201ENSMUST00000184721 107 ntBASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl40Q9Z2Q5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm13453-201ENSMUST00000118708 357 ntBASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl40Q9Z2Q5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm29541-201ENSMUST00000191351 678 ntBASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms