Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn8aQ9WTU3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Scn8aQ9WTU3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Mir1894-201ENSMUST00000122802 81 ntBASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Gm27701-201ENSMUST00000184498 110 ntBASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Gm37917-201ENSMUST00000194711 392 ntBASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Gm15823-201ENSMUST00000064305 670 ntBASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Gm13689-201ENSMUST00000119360 685 ntBASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Mir6392-201ENSMUST00000184924 108 ntBASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Mir7654-201ENSMUST00000185082 70 ntBASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Gm45384-201ENSMUST00000210451 277 ntBASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn8aQ9WTU3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms