Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm15693-201ENSMUST00000120470 637 ntBASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Cdc40Q9DC48 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm27989-201ENSMUST00000184721 107 ntBASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdc40Q9DC48 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Mir8102-201ENSMUST00000184148 139 ntBASIC13.16□□□□□ -0.3
Cdc40Q9DC48 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms